Plain English with Derek Thompson
Plain English with Derek Thompson

The Biggest Breakthroughs in Science Happening Right Now

If you're looking for a hopeful and mind-expanding conversation to round out the year, this one is for you. It's our breakthroughs of the year episode, covering 2023's biggest achievements in science and tech, including space technology, life extension, fusion, gene editing, vaccines,

Featured Speakers

Eric Topol Guest

Topics Discussed

Episode Summary

Executive Summary: The episode surveys 2023’s biggest biotech and science breakthroughs with Eric Topol, highlighting organ-specific aging “internal clocks,” progress in CRISPR and gene editing, vaccine advances, AI’s impact on drug discovery, cancer immunotherapy innovations, and the expanding promise—and risks—of GLP-1 drugs. The conversation emphasizes both the near-term limits and long-term transformative potential of these technologies.

Main Topics: Organ-specific biological aging clocks (Priority: 5/5): Topol’s top breakthrough was Stanford research that uses plasma proteins to estimate the biological age of 11 organs, enabling organ-level aging assessment and potentially more targeted prevention and treatment. CRISPR and next-generation genome editing (Priority: 5/5): The discussion covers the first FDA-approved CRISPR therapy for sickle cell disease, the promise of base and prime editing, major delivery challenges, and future applications in cholesterol, organ transplantation, and neurodegeneration. Vaccine breakthroughs and the golden age of vaccinology (Priority: 4/5): The hosts discuss malaria and RSV vaccine advances, the role of mRNA and structural biology, and why multiple vaccine successes are arriving after decades of parallel development. AI in biology and medicine (Priority: 4/5): Topol argues AlphaFold-like protein structure prediction is the most consequential AI contribution so far, accelerating protein science, drug design, and drug repurposing. Cancer immunotherapy via engineered bacteria/skin delivery (Priority: 4/5): A mouse study using engineered skin bacteria to deliver tumor antigens is framed as a novel way to stimulate T cells against melanoma and improve anti-cancer immune recognition. GLP-1 and multi-agonist metabolic drugs (Priority: 5/5): The episode explores the expanding benefits of GLP-1 drugs beyond diabetes and weight loss, including cardiovascular protection and possible effects on inflammation, while noting safety and access concerns. Space and energy breakthroughs as context-setting discoveries (Priority: 3/5): The opening notes Bennu asteroid samples with water-bearing clay and repeated fusion energy gains as major 2023 science milestones before shifting into biotech.

Key Arguments: Asteroid sample return from Bennu strengthens the theory that Earth’s water may have been delivered by asteroids, helping explain habitability and life’s origins. Fusion reached a historic threshold with net-energy-gain experiments and is moving from science fiction toward practical, though still distant, energy production. Organ-specific aging clocks are a major advance because aging is not uniform; different organs can age at different rates and predict disease outcomes. CRISPR’s first approval is important but still a workaround for sickle cell; next-generation editors like base and prime editing are more precise and could broaden cures. Delivery is the main bottleneck for gene editing, not knowing the target genes; liver and blood are easier, brain and heart remain hard. Vaccine breakthroughs reflect long incubation periods in research; parallel work across institutions and the mRNA era have finally produced major gains. AI’s biggest biomedicine success is protein structure prediction, which turns drug discovery from blind guessing into a more rational lock-and-key process. Engineered bacteria delivering tumor antigens may offer a new way to activate T cells against cancer, but human efficacy remains unproven. GLP-1 drugs are likely bigger than initially imagined because they reduce inflammation and cardiovascular risk in addition to weight and glucose. The biggest unresolved issues for GLP-1s are cost, long-term safety, muscle loss, and how to stop therapy without rebound. Future therapies may combine peptide drugs, better delivery systems, and possibly gene editing, but many ideas remain decades away.

Data Points: Asteroid mission duration: 7 years - NASA’s Bennu sample-return mission took seven years before returning material to Earth. Fusion reaction duration: less than 100 trillionths of a second - Lawrence Livermore’s December 2022 fusion experiment produced net energy for an extremely brief instant. Fusion energy output: about 3 megajoules - Energy produced in the initial net-positive fusion experiment referenced in the discussion. Fusion repeat experiment timeline: 7 months later - Scientists repeated and nearly doubled the net energy result in July 2023. Organ clocks measured: 11 organs - Stanford research estimated biological age for 11 different organs using plasma proteins. Share of people with accelerated aging in one organ: 20% - Topol cited the finding that one-fifth of people have accelerated aging in at least one organ. CRISPR therapy approval date: December 2023 - The first FDA-approved CRISPR medicine for sickle cell disease was approved in December. Sickle cell burden in the U.S.: about 100,000 people - The approved CRISPR therapy targets sickle cell disease patients in the United States. Malaria vaccine uptake: millions of children - The Oxford malaria vaccine had already been administered to millions of children. RSV infection rate in children: 97% before age 2 - An RSV vaccine was highlighted because nearly all children catch RSV by age two. RSV vaccine timeline: 15 months ago / 2023 - The first malaria vaccine endorsement was noted as occurring about 15 months before the conversation, with a second vaccine recommended in 2023. Proteins in AlphaFold context: 200 million proteins - Topol cited AI’s ability to predict structures across essentially the world’s proteome. Protein crystallization time comparison: 3 years vs 3 minutes - He contrasted traditional protein crystallization with AI-assisted prediction speed. Rare cholesterol trial size: 10 people - A base-editing approach was described for patients with familial hypercholesterolemia in a small reported cohort. Gene edits for pig organ compatibility: 63 genes - Topol cited the ability to genome-edit 63 pig genes to help avoid organ rejection. GLP-1 approval year: 2004 - Topol noted the first GLP-1 drug was approved in 2004, long before its broader uses were appreciated. Longest GLP-1 follow-up: 40 months - Current long-term safety data on GLP-1 drugs were said to be limited to about 40 months at high dose.

Pivotal Quotes: "The one that I found the most intriguing of all was the work from Stanford Tony Weiss-Coray and his colleagues on internal clocks." — Eric Topol: Topol names his top science breakthrough of the year. "The biggest life science breakthrough of our time. This is the ability to edit the genome." — Eric Topol: Topol explains the significance of CRISPR technology. "I think the biggest contribution thus far is the so-called alpha 2... the ability to predict... structure of basically the entire world's proteome." — Eric Topol: Topol describes AI’s most consequential biomedical advance.

Implications: The episode suggests medicine is entering a platform era: better aging diagnostics, gene editing, vaccines, AI-designed drugs, and metabolic therapies could reshape prevention and treatment, but cost, delivery, safety, and access will determine who benefits.

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